PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_93552g0020
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family SAP
Protein Properties Length: 236aa    MW: 25356.5 Da    PI: 5.5581
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_93552g0020genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP110.81.4e-3446235277453
            SAP 277 eelvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgv.vlreeeerrGlivssldasneayvvvdsrGvatvrrv 371
                     elvf GG +tdP+a++GW +lte +e + rvr+ +    +  t++++ +fdl  +g+ v  eee+ +G+iv s+da+   ++++ ++G+a++ ++
  MA_93552g0020  46 RELVFNGGDITDPDALRGWRLLTEQAERIARVRIGGDSLLLLATRSKVAAFDLETHGNrVSIEEETDEGIIVESVDANRGRFLAASNNGNARICQI 141
                    689***************************************************9965267778888**************************998 PP

            SAP 372 e.nleevcrfrv..........rg...aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfg 453
                      +l++vc f +          +g    +r+++g +n+  a + + gv+ +W+  + +  ly l e++g+v  lvad+ hva ++ d+ ihl+ f 
  MA_93552g0020 142 GtTLKNVCTFPLddlggadnnsSGsnnNHRKIVGTLNTWLAFISIDGVVHAWDAYSGA-GLYRLVEQIGDVFDLVADNEHVAGCA-DNGIHLWSFR 235
                    6267******87333333332212445689************************9977.79*********************997.5669****96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF509785.04E-877233IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.102.1E-690234IPR015943WD40/YVTN repeat-like-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MCGVHTRAKL GTTAHWSTSP VAIGIGWACM PGSPVTPVIY GMPARRELVF NGGDITDPDA  60
LRGWRLLTEQ AERIARVRIG GDSLLLLATR SKVAAFDLET HGNRVSIEEE TDEGIIVESV  120
DANRGRFLAA SNNGNARICQ IGTTLKNVCT FPLDDLGGAD NNSSGSNNNH RKIVGTLNTW  180
LAFISIDGVV HAWDAYSGAG LYRLVEQIGD VFDLVADNEH VAGCADNGIH LWSFRA
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP9756912
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.12e-26SAP family protein